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Yeast Genome > High Scoring Segment Pairs (HSPs)

The following information is about High Scoring Segment Pairs (HSPs).

High Scoring Segment Pairs (HSPs) Defined

In a BLAST search, an HSP is two sequence fragments (one from the query sequence and the other from a database sequence) that show a locally maximal alignment for which the alignment exceeds a pre-defined cutoff score.

This definition is in context to Yeast Genome. See more contextual defintions for High Scoring Segment Pairs (HSPs).


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